MRI - MicroRNA Identification

MiRNA Rfam Normalization Corpus

MiRNA Rfam Normalization Corpus was based on the miRNA interaction corpus (MIC) released by Bagewadi et al. which was available at here.

The corpus included the annotations of Rfam IDs to each annotated miRNA mention by two our annotators.

You can download the corpus from here

MRI web service

A REST (Representational State Transfer) web service for our miRNA identification component was implemented according to the protocol defined by the BeCalm (Biomedical annotation meta-server) platform.

The service can be accessed from the website of BeCalm or send an access request to Dr. Nai-Wun Chang

Reference

  • Statistical Principle-Based Approach for Recognizing and Normalizing MicroRNAs Described in Scientific Literature. To appear in Oxford Database
  • A Study on Identification of Organism and micro-RNA Mentions in Figure Captions. Nai-Wen Chang, Jitendra Jonnagaddala, Feng-Duo Wang, Hong-Jie Dai. Proceedings of the BioCreative VI workshop (2017)
  • Micro-RNA Recognition in Patents in BioCreative V.5. Chen-Kai Wang, Hong-Jie Dai and Nai-Wun Chang. Proceedings of the BioCreative V.5 Challenge Evaluation Workshop (2017)
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